Efficacy of Cellulose Degrading Bacteria from Soil in Production of Cellulase from Corn Waste
Bharathi V1, Jannathul Firdous2*, Resni Mona2, Noorzaid Muhamad2
1Department of Biochemistry, Shrimati Indira Gandhi College, Tiruchirappalli, India.
2Cluster for Integrative Physiology and Molecular Medicine (CIPMM), Faculty of Medicine, Universiti Kuala Lumpur Royal College of Medicine Perak, Jalan Greentown, 30450 Ipoh, Perak, Malaysia.
*Corresponding Author E-mail: jannathul.firdous@unikl.edu.my
ABSTRACT:
Cellulases are enzymes acts on plant cell wall material and are also synthesized by microorganisms during their growth on cellulosic materials. The cellulase enzymes have attracted considerable attention in recent years due to their great biotechnological and industrial applications. In the present study, soil bacteria were isolated and screened for cellulose degrading activity. They are further analysed to produce cellulase enzyme from corn waste. The enzyme production was optimized under various conditions such as pH, temperature, substrate and inoculum concentration. Total of 50 bacterial strains, only 12 strains were selected and when comparing 12 cellulolytic bacteria, Pseudomonas sp. showed highest zone formation with increased enzyme production by using corn waste as substrate. The different parameters effect on cellulase production were evaluated and optimized. Thus, the present study confirms that the corn waste can be used as an alternative carbon source for production of cellulase at high yield.
KEYWORDS: Bacteria, cellulase, corn waste, fermentation, substrate concentration, temperature.
INTRODUCTION:
Plant cell wall is composed of cellulose, lignin, hemicellulose and pectin substances. Cellulose is the organic polymer from plant source consisting of β-1, 4-linked glucose units. They contain about 100 to more than 10,000 glucose units, linked by inter and intra chain hydrogen bonds that give rigid structural stability to cellulose1.Because of its structural function, they are used as raw material for producing industrially important commodity products. The primary occurrence of cellulose is the existing lignocellulose material in forest, with wood as the most important source2. Coir, pineapple, banana leaves, rice and wheat straw are used to produce cellulose-based materials. Modified cellulose such as rayon used as synthetic fiber3.
Cellulose have used to make food wrap to prevent food spoilage4.
Cellulose can also be produced by various bacterial species in nature. Plant cellulose and bacterial cellulose have same chemical structure, but differ in their physical and chemical properties. Bacterial cellulose (BC) is an excellent material used in many novel applications since its uses are expanding rapidly due to environmental benefits and specific strength properties. Increase in fuel and petroleum costs results in altered use of lignocellulosics to produce ethanol and other sugars by fermentation5. Cellulolysis, the process of breaking down cellulose into glucose units are used to produce glucose in large scale. Corn cob is a major component of agricultural, domestic waste and is composed mainly of cellulose. This cellulose is treated with Aspergillus niger and Penicillium decumbens in producing bioethanol6. Corn husk is an attractive substrate in producing cellulose as they contain high cellulose content7.
Enzymes are nature’s catalysis that speed up the reactions where most enzymes today are produced from the microorganisms8. The term cellulase is a group of three enzymes such as β- 1, 4-D-glucan cellobiohydrolase (EC 3.2.1.91), which cleaves cellobiosyl units from the ends of cellulose chains, endo-β-1,4-D-glucanase (EC 3.2.1.4), cleaves internal glucosidic bonds and β-1, 4-glucosidase (EC 3.2.1.21), cleaves glucose units from cell oligosaccharides9. The role of microorganisms has been highlighted in cellulase enzyme production. Microorganisms such as bacteria, yeast and fungi are capable of producing cellulase. However, bacteria gained more importance due to their high diversity. Cellulase-producing bacteria such as Pseudomonas fluorescens, Bacillus subtilIs, E. coli and Serratia marcescens can also be isolated from soil10. When fermenting cassava tubers, amylase-producing bacterial and fungal strains was isolated with increase in amylase activity11. Cellulase was produced from Aspergillus niger by solid state fermentation using bio wastes such as sugarcane bagasse and wheat bran12. The cellulolytic enzyme from cow dung isolated bacteria was obtained using Carboxymethyl cellulose clear zone (CMCZ) and Filter paper assay (FPA) techniques13. The purpose of this work was to explore the potential of cellulose degrading bacteria from soil for highest cellulase activity from corn waste and to examine bacterial growth at optimum working conditions.
MATERIALS AND METHODS:
Alkali extraction of sample:
Corn cob was collected from agriculture fields in padhma pazhamthirzolai, Trichy. Treatment of corn cob with alkali at suitable modest concentrations and temperatures can produce 50% of the original biomass such as extractives, hemicelluloses and lignin. During pre-treatment, adding the increased amount of alkali will solubilize the plant cell-wall and improve the enzymatic hydrolysis of cell-wall polysaccharide14. Cellulose waste was soaked in 100 ml of 6% NaOH separately and incubated at room temperature for 10 hrs with an agitation of 150 rpm and autoclaving at 121°C for 30 min. The residues were collected and washed extensively with tap water until neutral pH was reached, filtered and dried at 65°C for two days.
Bleaching:
Corn waste was bleached with the hypochlorite-hydrogen peroxide process similar to the method described by Ibrahim et al.15
Estimation of cellulose from treated sample:
Cellulose content was estimated by the method of Uppdegraff et al. To about 100 mg of pretreated cellulose wastes, about 5ml of Nitric reagent was added to boil and cooled. It was centrifuged at 5000 rpm for 5min. The pellet was washed with distilled water and 67% sulphuric acid was added. To 1ml of the each diluted solution, 10ml of freshly prepared ice cold Anthrone reagent was added and boiled in a boiling water bath for 10 min at 100˚C. Absorbance was recorded at 600nm16.
Isolation of bacteria:
Soil sample were collected for the isolation of cellulose degrading bacteria from Aalavanthanaillur village, Trichy, Tamilnadu, India. Thermo intolerant bacteriawas removed from the soil by serial suspension in sterile water and heated for 15 minutes at 80°C. After suitable dilutions the samples were incubated in nutrient agar plates for 48 hours at 30°C as methods described by Sethi et al.10
Screening of cellulolytic bacteria:
Based on morphological and biochemical characteristics, cellulolytic bacteria were identified and were inoculated in Carboxy methyl cellulose (CMC) medium. Identified cellulolytic species were screened for cellulase enzyme production by submerged fermentation process17.
Crude enzyme production and its Estimation:
Submerged fermentation procedure was followed to produce crude enzyme and the method used was described by Sharma et al 18. Finally, the broth was centrifuged at 1600rpm for 20 min at 4°C. The supernatant obtained was used as a crude enzyme source. Total cellulase activity in the culture filtrate was determined according to the standard method described by Hankin et al19.
Optimization of Culture Conditions for Enzyme Production:
Effect of pH, temperature, incubation period, substrate concentration and inoculum were carried out as methods described by mandels et al20.
RESULTS AND DISCUSSION:
Estimation of cellulose from treated sample:
The collected samples after pre-treated with alkali and bleached, yellow substrate changed its colour into pale yellow as shown in Figure 1. Treated sample was estimated for cellulose production using nitric acid reagent where the pre-treated corn waste contains 97mg of cellulose.
a b
Figure 1: Corn waste sample before treatment (a) and after treatment (b) with alkali and bleaching.
The most important industrial material is cellulose and other wood products. The waste from industries can cause environmental pollution. Proper utilization of these wastes by convert them into useful by-products may eliminate the adverse effects caused by them21. Bioethanol was produced from rice straw using cellulase enzyme hydrolysis obtained from bacterial source22. Rice chaff is a polished substance extracted from Oryza sativa L.and by solid state fermentation of rice chaff by Penicillium chrysogenum, fibrinolytic enzyme was produced for use in thrombolytic therapy23. In the present study, corn waste was selected as it is a rich source of cellulose, so that diverse group of cellulolytic microorganisms can utilize them. Further, it is easily available with ease of processing. Even cost effectiveness plays an important role for its selection.
Isolation and screening of cellulolytic bacteria:
To get the cellulolytic bacteria, 50 bacterial strains were isolated from soil through culturing them in appropriate medium and screened them for cellulase activity. On screening fifty bacterial isolates using CMC agar medium, twelve isolates showed cellulolytic activity by forming zone formation. Out of twelve cellulolytic bacteria, bacterial strain (9) showed highest zone formation (0.8cm) and its cellulase activity was found as 0.480(u/ml). To identify the resulted bacterial isolate, various biochemical tests were performed and the bacterial strain showed various positive characteristics such as motility, indole utilization,Voges proskauer, Citrate utilization, glucose fermentation, catalase, oxidase and nitrate reduction tests.The identified organism is Pseudomonas species as shown in Figure 2.
Figure 2: Zone of cellulose utilization by cellulase producing bacterial strain (Pseudomonas sp.) grown on Luria agar supplemented with 0.1 %CMC
Degradation of cellulosic materials is a complex process requiring participation by a number of microbial enzymes. Habitats that contain these substrates are the best sources to find these microorganisms. Cellulose is actually degraded by an enzyme cellulase that is naturally produced by several microorganisms, commonly by bacteria and fungi. Screening for the isolates with cellulolytic activity revealed that the bacteria were more prolific producers of the enzyme24. Similarly, L-asparaginase was produced from groundnut oil cake by employing Aspergillus sp. under solid-state fermentation25. Pseudomonas aeruginosa may involve efficiently in dispersant utilization (solvent-based and water-based) and biodegradation26. In screening of new antibiotics, several actinomycetes were isolated from soil samples27. Antibacterial compoundswere produced by some actinomycetes that was isolated from sedimented water28.
Enzyme production and its optimization:
Pseudomonas sp. showing cellulolytic activity was used for enzyme production assays on liquid medium. After 72 hrs of culture, the supernatant was separated by centrifugation and used to evaluate total cellulase activity. The cellulase enzyme produced by selected bacterial strain is 0.480(U/ml). In order to determine the optimum pH value for the bacterial enzyme, the activity of the enzyme was assayed between the pH 2 to 10. The optimum pH was 6 as shown in Table 1.
Table 1: Effect of pH on enzyme production
|
S.No |
pH |
Enzyme U/ml |
|
1 |
2 |
0.165±0.013 |
|
2 |
4 |
0.183±0.009 |
|
3 |
6 |
0.221±0.009 |
|
4 |
8 |
0.116±0.014 |
|
5 |
10 |
0.098±0.009 |
Cellulase production was expressed and gradually increased as the pH values increased from 4 to 6 and reached its maximum at pH of 6 with production of about 0.221 U/ml of cellulase respectively. Our results are in accordance with Bakare et al. who have optimum pH values around 6 to 7. pH values were adjusted using NaOH/HCl, to assess the effect of pH on cellulase enzyme production29.
The production media was prepared with all the nutritional components with the alternative in the temperature alone varying from (20 °C, 40 °C, 60 °C, and 80 °C) was inoculated with the culture and incubated. After incubation the cellulase activity was estimated. The optimum temperature was found to be 40˚C for cellulase production as shown in Table 2.
Table 2: Effect of temperature on enzyme production
|
S.No |
Temperature (˚C) |
Enzyme U/ml |
|
1 |
20 |
0.027±0.003 |
|
2 |
40 |
0.240±0.002 |
|
3 |
60 |
0.168±0.008 |
|
4 |
80 |
0.086±0.014 |
The enzyme activity of selected strain was gradually increased with the increase in temperature and the highest cellulase activity was found to be 0.240U/ml at 40°C. This temperature influences the enzyme production at increased rate by altering the cell membrane properties. The result is in agreement with the other reports on bacterial enzyme production30.
To find the suitable concentration of substrate (corn waste), production was carried out using different concentration such as 0.5, 1.0, 1.5 and 2g/100ml of the production medium. Cellulase is an inducible enzyme and it is affected by the nature of the substrates used for production. Corn waste of 1g showed higher enzyme production of about 0.097 U/ml as shown in Table 3.
Table 3: Effect of substrate concentrationon enzyme production
|
S.No |
Substrate Concentration (g) |
Enzyme U/ml |
|
1 |
0.5 |
0.098±0.002 |
|
2 |
1 |
0.097±0.007 |
|
3 |
1.5 |
0.120±0.001 |
|
4 |
2 |
0.068±0.004 |
These substrates of cellulase enzyme production under mechanical shaking increased the medium aeration and permitted better contact between the substrate and the microorganisms causing significant differences in favour of the quantity of enzyme produced in agitated system. The submerged fermentation technique has been widely used in the production of cellulases and the other enzymes. The production of cellulase from corn waste in submerged fermentation under optimum conditions were performed where the enzyme production was higher.
The production medium was inoculated with culture containing various inoculum concentrations (0.5-2ml). The cellulase production was higher at 1ml of inoculum as shown in Table 4.
Table 4: Effect of Inoculum on enzyme production
|
S.no |
Inoculum (ml) |
Enzyme U/ml |
|
1 |
0.5 |
0.080±0.002 |
|
2 |
1 |
0.117±0.007 |
|
3 |
1.5 |
0.141±0.001 |
|
4 |
2 |
0.054±0.006 |
The culture used for inoculation in the fermentation medium must be in healthy, active state and of optimum size, possibly in the log phase, thus it will be in its high rate for substrate conversion.Enzyme production was tested with different pH, different temperature, different substrate concentration and incoculum concentration. Based on the results, the fermentation media has been designed and the production of cellulase was carried out.
CONCLUSION:
Cellulolytic bacteria isolated from soil sample were screened for cellulase enzyme production with 12 strains showed cellulolytic activity and Pseudomonassp. showed higher zone formation which was identified by performing biochemical test. Corn waste when used as a substrate results in increased enzyme production. With optimized condition of pH, temperature, substrate concentration and incoculum concentration, industrial production of cellulase is reliable with Pseudomonas sp. However, further studies are required for the enzyme purification.
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Received on 30.05.2018 Modified on 09.06.2018
Accepted on 03.08.2018 © RJPT All right reserved
Research J. Pharm. and Tech 2018; 11(9): 4024-4028.
DOI: 10.5958/0974-360X.2018.00740.0